Review Article | | Peer-Reviewed

Hybrid Coffee (Coffea arabica L) Plantlet Production via Indirect Somatic Embryogenesis in Ethiopia: Current Statue and Future Direction

Published in Plant (Volume 12, Issue 4)
Received: 13 August 2024     Accepted: 9 September 2024     Published: 18 October 2024
Views:       Downloads:
Abstract

Traditional hybrid coffee propagation methods using seed or vegetative cuttings has tremendous limitations. Seed propagation is associated with hand pollination which is time consuming and need large number of skilled labor. On the other hand, vegetative cuttings ensure uniformity, but; cuttings generate relatively low multiplication rates as they can only be obtained from orthotropic branches. Multiplication by tissue culture techniques could provide a best alternative to these traditional methods of coffee propagation as it allowed the production of relatively uniform plantlets on a large scale in a shorter period in any climatic condition. Among tissue culture techniques, indirect somatic embryogenesis of hybrid coffee plays substantial role in rapid industrial scale multiplication of high valued varities. Research on somatic embryogenesis of C. arabica hybrid has been conducted since the late 70s with the objectives to substitute the conventional vegetative propagation of selected varieties. In Ethiopia, in vitro propagation of hybrid coffee is recent phenomenon and research on indirect somatic embryogenesis is already well underway by different research groups. Here, we discussed the current status of coffee research on somatic embryogenesis in general and specifically, we provide recommendations for future research for the establishment of mass propagation protocol for F1 hybrids varities in Ethiopia that utilized wild endogenous lines.

Published in Plant (Volume 12, Issue 4)
DOI 10.11648/j.plant.20241204.11
Page(s) 87-94
Creative Commons

This is an Open Access article, distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution and reproduction in any medium or format, provided the original work is properly cited.

Copyright

Copyright © The Author(s), 2024. Published by Science Publishing Group

Keywords

Indirect Somatic Embryogenesis, Hybrid Coffee, Somatic Embryo, Mass Propagation, C. arabica L

References
[1] International Coffee Organization (ICO). Latest facts and figures about the global coffee trade from ICO. Retrieved November 14, 2018, from
[2] Tefera, Abu. Ethiopia Coffee Annual MY15/16. USDA FAS. 2015. Retrieved from
[3] Lashermes, P., Trouslot, P., Anthony, F., Combes, M-C., Charrier, A. Genetic diversity for RAPD markers between cultivated and wild accessions of Coffea arabica. Euphytica, 1996. 87, 59–64.
[4] Anthony, F., Combes, M-C., Astorga, C., Bertrand, B., Graziosi, G., Lashermes, P. The origin of cultivated Coffea arabica L. varieties revealed by AFLP and SSR markers. Theor Appl Genet, 2002 104, 894–900.
[5] Behailu, A., Bayetta, B., Fikadu, T. Developing coffee hybrid varieties. In: Girma Adugna, Bayetta Bellachew, Tesfaye Shimber, Endale Taye, Kufa T, eds. Coffee, diversity & knowledge, Proceedings of a national workshop: Four decades of coffee research and development in Ethiopia, 14-17 August 2007. Addis Ababa: Ethiopian Institute of Agricultural Research.
[6] Dubale, P., Teketay, D. The need for forest coffee germplasm conservation in Ethiopia and its significance in the control of coffee diseases. In: Proceedings of the Coffee Berry Disease workshop, 13-15 August 1999, Ethiopian Agricultural Organization (EARO) Addis Ababa, Ethiopia, 2000. pp 125-135.
[7] Hindorf., H, Omondi., O. C.(2011). A review of three major fungal diseases of Coffea arabica L. in the rainforests of Ethiopia and progress in breeding for resistance in Kenya. Journal of Advanced Research, 2, 109–120.
[8] Van der Vossen H., Bertrand B., Charrier A. Next generation variety development for sustainable production of arabica coffee (Coffea arabica L.): a review. Euphytica, 2015. 204, 243–256.
[9] Bellachew, B., Labouisse, J. P. Arabica coffee (Coffea arabica L.) local landrace development strategy in its center of origin and diversity. In: 21st International Coffee Science Conference, Montpellier, 2007. 11-15 September Paris: ASIC.
[10] Amaha, M., Bellachew, B. (1983). Hetrosis in cross of indigenous coffee selected for yield and resistance to Coffee Berry Disease II-First three Years. Ethiopian Journal of Agricultural Sciences, 1, 13-21.
[11] Van der Vossen HAM. (2001). Coffee breeding practices. In: Clarke RJ, Vitzthum OG (eds) Coffee: recent developments. Blackwell Science Ltd, Oxford, pp 184–201.
[12] Kumar, V., Naidu, M. M., Ravishankar, G. A. Developments in coffee biotechnology—in vitro plant propagation and crop improvement. Plant Cell Tiss Organ Cult, 2006. 87, 49–65.
[13] Carneiro, M. F., Ribeiro, T. M. O. In vitro meristem culture and plant regeneration in some genotypes of Coffea arabica. Brot Gene´ t, 1989. 85, 127–138.
[14] Custers., J. B. M. Clonal propagation of Coffea arabica L by nodal culture. In: Proceedings of 9 th International Scientific Colloquium on Coffee (ASIC), London, UK, 1980. pp. 589-596.
[15] Ribeiro., T. M. O, Carneiro., M. F. Micropropagation by nodal culture of cultivars Caturra, Geisha and Catimor regenerated invitro. In: Proceedings of 13th colloquium of international coffee science association (ASIC), Paris, France, 1989. pp 757-765.
[16] Giridhar, P., Indu, E. P., Ravishankar, G. A. et al.. Influence of Triacontanol on somatic embryogenesis in Coffea arabica L. and Coffea canephora P. ex. Fr. In Vitro Cell Dev Biol Plant, 2004. 40, 200–203.
[17] Sondahl, M. R., Baumann, T. W. Developmental and Cell Biology Coffee breeding practices. In: Clarke RJ, Vitzthum OG (eds) Coffee: recent developments. Blackwell Science Ltd, Oxford, 2001. pp 202–220.
[18] Georgiev, V., Schumann, A., Pavlov, A., Bley, T. Temporary immersion systems in plant. Biotechnol Eng Life Sci, 2014. 14, 607–621.
[19] Etienne, H., Bertrand, B., Georget, F., Lartaud, M., Montes, F., Dechamp, E., et al. Development of coffee somatic and zygotic embryos to plants differs in the morphological, histochemical and hydration aspects. Tree Physiol, 2013. 33, 640–653.
[20] Afreen., F. Temporary immersion bioreactor. In Gupta, S. D., Ibaraki, Y. (Eds.), Plan Tissue Culture Engineering. 2006. (pp. 187-201), Springer, Netherlands.
[21] Molina, D. M., Aponte, M. E., Cortina, H., Moreno, G. The effect of genotype and explant age on somatic embryogenesis of coffee. Plant Cell Tissue Organ Cult, 2002. 71, 117–123.
[22] Campos, N. A., Panis, B., & Carpentier, S. C. Somatic Embryogenesis in Coffee: The Evolution of Biotechnology and the Integration of Omics Technologies Offer Great Opportunities. Frontiers in plant science. 2017. 8, 1460.
[23] Campos, N. A., Paiva, L. V., Panis, B., Carpentier, S. C. The proteome profile of embryogenic cell suspensions of Coffea arabica L. Proteomics, 2016. 16, 1001–1005.
[24] Etienne, H., Bertrand, B. Somaclonal variation in Coffea arabica: effects of genotype and embryogenic cell suspension age on frequency and phenotype of variants. Tree Physiol, 2003. 23, 419–426.
[25] Etienne, H. Somatic embryogenesis protocol: coffee (Coffea arabica L. and C. canephora P.). In Jain S. M., Gupta P. K., (eds.), Protocols for Somatic Embryogenesis in Woody Plants, Dordrecht: Springer, 2005. 167–179.
[26] Quiroz-Figueroa, F. R., Rojas-Herrera R., Galaz-Avalos, R. M., Loyola-Vargas, V. M. Embryo production through somatic embryogenesis can be used to study cell differentiation in plants. Plant Cell Tissue Organ Cult, 2006. 86, 285–301.
[27] Smertenko, A., Bozhkov, P. V. Somatic embryogenesis: life and death processes during apical–basal patterning. Journal of Experimental Botany, 2013. 65, (5), 1343–1360.
[28] De Feria, M., Jimenez, E., Barbon, R., Capote, A., Chavez, M., Quiala, E. (2003). Effect of dissolved oxygen concentration on differentiation of somatic embryos of Coffea arabica cv. Catimor 9722.Plant Cell Tissue Organ Cult, 72, 1–6.
[29] Heringer., A. S., Santa-Catarina., C., Silveira., V. Insights from proteomic studies into plant somatic embryogenesis. Proteomics, 2018. 18, 5-6.
[30] Fehér,. A, Bernula., D, Gémes., K. The Many Ways of Somatic Embryo Initiation. In: V. M. Loyola-Vargas and N. Ochoa-Alejo (eds.), Somatic Embryogenesis: Fundamental Aspects and Applications. Springer International Publishing, Switzerland, 2016. Pp 121-150.
[31] Yang, X., Zhang, X. Regulation of somatic embryogenesis in higher plants. Crit. Rev. Plant Sci., 2010. 29, 36–57.
[32] Fehér, A., Pasternak, T. P., Dudits, D. Transition of somatic plant cells to an embryogenic state. Plant Cell Tissue Organ Cult, 2003. 74, 201–228.
[33] Jiménez V. M. Involvement of plant hormones and plant growth regulators on in vitro somatic embryogenesis. Plant Growth Regul. 2005. 47 91–110.
[34] Hervé., E, Romain., G., Thierry., B, Jean-Christophe., B, Estelle., J. Plant Fidelity in Somatic Embryogenesis-Regenerated Plants. In: V. M. Loyola-Vargas and N. Ochoa-Alejo (eds.), Somatic Embryogenesis: Fundamental Aspects and Applications. Springer International Publishing, Switzerland, 2016. Pp 121-150.
[35] Staritsky, G. Embryoid formation in callus tissues of coffee. Acta Bot. Neerl. 1970. 19 509–514.
[36] Sondahl, M. R., Sharp, W. R. High frequency induction of somatic embryos in cultured leaf explants of Coffea arabica L. Zeitschriftfür Pflanzenphysiol, 1976. 81, 395–408.
[37] Dublin, P. Embryogenese somatique directe sur fragments de feuilles de cafeier arabusta. Café Cacao. 1981. 25, 237–242.
[38] Yasuda, T., Fujii, Y., Yamaguchi, T. Embryogenic callus induction from Coffea arabica leaf explants by benzyladenine. Plant Cell Physiol, 1985. 26, 595–597.
[39] Berthouly, M., Michaux-Ferriere N. High frequency somatic embryogenesis in Coffea canephora. Plant Cell Tissue Organ Cult, 1996. 44, 169–176.
[40] Teixeira, J. B., Junqueira, C. S., Pereira, A. J. P., Mello, R. I. S., Silva, A. P. D., Mundim, D. A. Multiplicação Clonal de Café (Coffea arabica L.) via Embriogenêse Somática, 1st Edn. Brasília: 2004. EMBRAPA.
[41] Ahmed, W., Feyissa, T., Disasa, T. Somatic embryogenesis of a coffee (Coffea arabica L.) hybrid using leaf explants, The Journal of Horticultural Science and Biotechnology. 2013. 88, 4, 469-475.
[42] Avila-Victor, C. M., Ordaz-Chaparro, V. M., Arjona-Suárez, E. d. J., Iracheta-Donjuan, L., Gómez-Merino, F. C., Robledo-Paz, A. In Vitro Mass Propagation of Coffee Plants (Coffea arabica L. var. Colombia) through Indirect Somatic Embryogenesis. Plants. 2023. 12, 1237.
[43] Van Boxtel J., Berthouly M. High frequency somatic embryogenesis from coffee leaves. Plant Cell Tissue Organ Cult, 1996. 44, 7–17.
[44] Barry-Etienne D., Bertrand B., Vasquez N., Etienne H. Direct sowing of Coffea arabica somatic embryos mass-produced in a bioreactor and regeneration of plants. Plant Cell Rep, 1999. 19, 111–117.
[45] Docos., JP, Lambot., C., Petiard V. Bioreactors for Coffee Mass Propagation by Somatic Embryogenesis. International Journal of Plant Developmental Biology, 2007. 1, 1-12.
[46] Aguilar ME, Wang X-y, Escalona M, Yan L and Huang L-f. Somatic embryogenesis of Arabica coffee in temporary immersion culture: Advances, limitations, and perspectives for mass propagation of selected genotypes. Front. Plant Sci. 2022. 13: 994578.
[47] Berthouly M, Dufour M, Alvard D, Carasco C, Alemano L, Teisson C. Coffee micropropagation in a liquid medium using the temporary immersion technique. In: ASIC (Ed) Proceeding of 16th Colloquium of International Coffee Science Association, ASIC, Vevey, Switzerland, 1995. pp 514-519.
[48] Barry-Etienne, D., Bertrand, B., Schlönvoigt, A., Etienne, H. The morphological variability within a population of coffee somatic embryos produced in a bioreactor affects the regeneration capacity and the development in the nursery. Plant Cell, Tissue and Organ Culture, 2002. 68, 153-162.
[49] Gatti, E., Sgarbi, E., Ozudogru, E. A., Lambardi, M. The effect of Plantform™ bioreactor on micropropagation of Quercus robur in comparison to a conventional in vitro culture system on gelledmedium, and assessment of the microenvironment influence on leaf structure. Plant Biosyst, 2017. 151, 1129–1136.
[50] Benelli, C., De Carlo, A. (2018). In vitro multiplication and growth improvement of Olea europaea L. cv Canino with temporary immersion system (Plantform™). 3 Biotech, 8,317.
[51] Almusawi., A. H. A., Sayegh., A. J., Alshanaw., A. M. S., Griffis., J. L.. Plantform Bioreactor for Mass Micropropagation of Date Palm. In Jameel M. Al-Khayri et al. (Eds.), Date Palm Biotechnology Protocols Volume 1: Tissue Culture Applications, 2017. pp. 251-265. Springer Science+Business Media LLC.
[52] Wang, Z., Gerstein, M., Snyder., M. (2009). RNA-Seq: a revolutionary tool for transcriptomics. Nat Rev Genet. 2009.10(1), 57–63.
[53] Cetz-Chel., J. E, Loyola-Vargas., V. M. Transcriptome Profile of Somatic Embryogenesis. In: V. M. Loyola-Vargas and N. Ochoa-Alejo (eds.), Somatic Embryogenesis: Fundamental Aspects and Applications. Springer International Publishing, Switzerland, 2016. Pp 121-150.
[54] Gao,. L. M., Zhang,. J., Hou,. Y., Yao., Y. C. & Ji., Q. L. RNA-Seq screening of differentially-expressed genes during somatic embryogenesis in Fragaria × ananassa Duch. ‘Benihopp’, The Journal of Horticultural Science and Biotechnology, 2015. 90(6), 671-681.
[55] Cao, A., Zheng, Y., Yu, Y., Wang, X., Shao, D., Sun, J., Baiming Cui. B. Comparative Transcriptome Analysis of SE initial dedifferentiation in cotton of different SE capability. Scientific Report, 2017. 7, 8583.
[56] Chu, Z., Chen, J., Sun, J., Dong, Z., Yang, X., Wang, Y... Dangqun Cui, D. De novo assembly and comparative analysis of the transcriptome of embryogenic callus formation in bread wheat (Triticum aestivum L.). BMC Plant Biology, 2017. 17, 244.
[57] Lashermes, P., Hueber, Y., Combes, M., Severac, D., Dereeper., A. Inter-genomic DNA Exchanges and Homeologous Gene Silencing Shaped the Nascent Allopolyploid Coffee Genome (Coffea arabica L.). G3: Genes/Genome/Genetics, 2016. 6(9), 2937-2948.
[58] Florez, J. C., Mofatto, L. S., Freitas‑Lopes, R. D. L., Ferreira, S. S., Zambolim, E. M., Carazzolle, M. F., Zambolim, L., Caixeta, E. T. High throughput transcriptome analysis of coffee reveals prehaustorial resistance in response to Hemileia vastatrix infection. Plant Mol Biol, 2017. 95(6), 607-623.
[59] Ivamoto, S. T., Reis, O., JuÂnior., Domingues, D. S., dos Santos, T. B., de Oliveira, F. F., Pot, D, et al. Transcriptome Analysis of Leaves, Flowers and Fruits Perisperm of Coffea arabica L. Reveals the Differential Expression of Genes Involved in Raffinose Biosynthesis. PLoS ONE, 2017. 12(1): e0169595.
[60] Dos Santos, T. B., Soares, J. D. M., Lima, J. E., Silva. J. C., Ivamoto, S. T., Baba1, V. Y.,... Domingues, D. S. An integrated analysis of mRNA and sRNA transcriptional profiles in Coffea arabica L. roots: insights on nitrogen starvation responses. 2018. Functional & Integrative Genomics.
[61] Quiroz-Figueroa, F., Méndez-Zeel, M., Sánchez-Teyer, F., Rojas-Herrera, R., Loyola-Vargas., V. Differential gene expression in embryogenic and non-embryogenic clusters from cell suspension cultures of Coffea arabica. J. Plant Physiol, 2002. 159, 1267-1270.
[62] Tonietto, A., Sato, J. H., Teixeira, J. B., de Souza, E., Pedrosa, F., Franco, O., Mehta, A. Proteomic Analysis of Developing Somatic Embryos of Coffea arabica. Plant Mol Biol Rep, 2012. 30, 1393–1399.
[63] Garbis, S., Lubec, G., Fountoulakis., M. Limitations of current proteomics technologies. Journal of Chromatography A, 2005. 1077, 1–18.
[64] Santana-Buzzy, N., Rojas-Herrera, R., Galaz-Ávalos, R. M., Ku-Cauich, J. R., Mijangos-Cortés J., Gutiérrez-Pacheco, L. C., et al. Advances in coffee tissue culture and its practical applications. Vitro Cell. Dev. Biol. Plant, 2007. 43, 507–520.
[65] Traore, A., Maximov, S. N., Guiltinan, M. J. Micropropagation of Theobroma cacao L. using somatic embryo-derived plants. In Vitro Cell. Dev. Biol., 2003. 39, 332–337.
Cite This Article
  • APA Style

    Gebremariam, E. (2024). Hybrid Coffee (Coffea arabica L) Plantlet Production via Indirect Somatic Embryogenesis in Ethiopia: Current Statue and Future Direction. Plant, 12(4), 87-94. https://doi.org/10.11648/j.plant.20241204.11

    Copy | Download

    ACS Style

    Gebremariam, E. Hybrid Coffee (Coffea arabica L) Plantlet Production via Indirect Somatic Embryogenesis in Ethiopia: Current Statue and Future Direction. Plant. 2024, 12(4), 87-94. doi: 10.11648/j.plant.20241204.11

    Copy | Download

    AMA Style

    Gebremariam E. Hybrid Coffee (Coffea arabica L) Plantlet Production via Indirect Somatic Embryogenesis in Ethiopia: Current Statue and Future Direction. Plant. 2024;12(4):87-94. doi: 10.11648/j.plant.20241204.11

    Copy | Download

  • @article{10.11648/j.plant.20241204.11,
      author = {Elyas Gebremariam},
      title = {Hybrid Coffee (Coffea arabica L) Plantlet Production via Indirect Somatic Embryogenesis in Ethiopia: Current Statue and Future Direction
    },
      journal = {Plant},
      volume = {12},
      number = {4},
      pages = {87-94},
      doi = {10.11648/j.plant.20241204.11},
      url = {https://doi.org/10.11648/j.plant.20241204.11},
      eprint = {https://article.sciencepublishinggroup.com/pdf/10.11648.j.plant.20241204.11},
      abstract = {Traditional hybrid coffee propagation methods using seed or vegetative cuttings has tremendous limitations. Seed propagation is associated with hand pollination which is time consuming and need large number of skilled labor. On the other hand, vegetative cuttings ensure uniformity, but; cuttings generate relatively low multiplication rates as they can only be obtained from orthotropic branches. Multiplication by tissue culture techniques could provide a best alternative to these traditional methods of coffee propagation as it allowed the production of relatively uniform plantlets on a large scale in a shorter period in any climatic condition. Among tissue culture techniques, indirect somatic embryogenesis of hybrid coffee plays substantial role in rapid industrial scale multiplication of high valued varities. Research on somatic embryogenesis of C. arabica hybrid has been conducted since the late 70s with the objectives to substitute the conventional vegetative propagation of selected varieties. In Ethiopia, in vitro propagation of hybrid coffee is recent phenomenon and research on indirect somatic embryogenesis is already well underway by different research groups. Here, we discussed the current status of coffee research on somatic embryogenesis in general and specifically, we provide recommendations for future research for the establishment of mass propagation protocol for F1 hybrids varities in Ethiopia that utilized wild endogenous lines.
    },
     year = {2024}
    }
    

    Copy | Download

  • TY  - JOUR
    T1  - Hybrid Coffee (Coffea arabica L) Plantlet Production via Indirect Somatic Embryogenesis in Ethiopia: Current Statue and Future Direction
    
    AU  - Elyas Gebremariam
    Y1  - 2024/10/18
    PY  - 2024
    N1  - https://doi.org/10.11648/j.plant.20241204.11
    DO  - 10.11648/j.plant.20241204.11
    T2  - Plant
    JF  - Plant
    JO  - Plant
    SP  - 87
    EP  - 94
    PB  - Science Publishing Group
    SN  - 2331-0677
    UR  - https://doi.org/10.11648/j.plant.20241204.11
    AB  - Traditional hybrid coffee propagation methods using seed or vegetative cuttings has tremendous limitations. Seed propagation is associated with hand pollination which is time consuming and need large number of skilled labor. On the other hand, vegetative cuttings ensure uniformity, but; cuttings generate relatively low multiplication rates as they can only be obtained from orthotropic branches. Multiplication by tissue culture techniques could provide a best alternative to these traditional methods of coffee propagation as it allowed the production of relatively uniform plantlets on a large scale in a shorter period in any climatic condition. Among tissue culture techniques, indirect somatic embryogenesis of hybrid coffee plays substantial role in rapid industrial scale multiplication of high valued varities. Research on somatic embryogenesis of C. arabica hybrid has been conducted since the late 70s with the objectives to substitute the conventional vegetative propagation of selected varieties. In Ethiopia, in vitro propagation of hybrid coffee is recent phenomenon and research on indirect somatic embryogenesis is already well underway by different research groups. Here, we discussed the current status of coffee research on somatic embryogenesis in general and specifically, we provide recommendations for future research for the establishment of mass propagation protocol for F1 hybrids varities in Ethiopia that utilized wild endogenous lines.
    
    VL  - 12
    IS  - 4
    ER  - 

    Copy | Download

Author Information
  • Sections